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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954690.1_cds_XP_016493471.1_83579
CDS Infomation

[gene=LOC107812814] [db_xref=GeneID:107812814] [protein=polygalacturonase-like] [protein_id=XP_016493471.1] [location=complement(join(184033..184254,184350..184578,185172..185461,186002..186454))] [gbkey=CDS]
Sequence

ATGAGCAAAATGAGTTTACTAGAAAACCTCCCACTTTTTTTCACAATCTTATTCTTGACC
TTGAACTCTTCCATTGCTGCAAATGCAATATATAATGTCAAAAACTATGGAGCAAAATCC
AATGGAAAAATCGATTCATCCAAAGCATTTCTGGGTGCATGGGCTGCAGCATGTGCATCT
ACTAGCCCTGCCACCATTTACGTGCCAAAGGGAAGTTACTTGCTTAAAAGTGCATATTTT
CTAGGTGAAACATGCAAGAGCAAGGCTATTACCTTACATATTGATGGCACTATATTAGCT
CCATCGGATTATAATGTCATTCGGAATGAAGAAAATTGGATCAAATTTGAAAGAGTCACT
GGAGTTTCCATATATGGTGGAACCTTAGATGGACAAGGTGCTAGTCTTTGGGCTTGCAAA
AACTCTACCAAGAATTGTCCTCAAGGAATAATGGGACTTACTTTTTCCAACTCCAGCAAC
ATAGATATAAGAGGATTAACATCGCAAAACAGCCAAATGTTCCACATATTGGTAGATAAT
TGTCATAATGTGAAGCTACAAGGAGTAAAGGTGTCAGCTCCAGGAAACAGTCCCAACACC
GATGGTATTCACGTCCAATATTCGTCTAAAGTCACCATTATCAACTCTCATATTGGAACT
GGAGATGATTGTATCTCAATTGGCCCTGGAACCTCCAACTTATGGATCGAAAACATAGCC
TGTGGCCCTGGCCATGGAATAAGCATTGGGAGTTTAGGCTGGGTACTAGAAGAGCCTGGA
GTTCAAAATGTTACAGTTAAAACAGTCACGTTCAGTGGAACACAAAATGGATTGAGAGTA
AAAACATGGGCAAGATCAAGCAATGGCTTTGTCAGAAATGTTCTCTTCCAGCATATAGTT
ATGGCTAACGTTCAAAACCCTATCATCATAGACCAAAATTATTGCCCTAACAATGACAAT
TGCCCTCATCAGGGCTCGGGTGTGAAAATCAGTGACGTAAAGTATCAAGACATACGCGGT
ACATCTGCTACGGAAGTTGCAGTGAAATTTGATTGTAGCAAAAAATATCCATGCAGTGGC
ATAGCACTAGAAGATGTAAATCTTAGTTATAGAGATCAACCAGCTGAAGCTTCTTGTGTT
AATGTTGGAGGAAGAGCTTCTGGTTCTGAAAAACAAACTAGTTGCTTAGGTTAG

Peptide Sequence

PEP ID

XP_016493471.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MSKMSLLENLPLFFTILFLTLNSSIAANAIYNVKNYGAKSNGKIDSSKAFLGAWAAACAS
TSPATIYVPKGSYLLKSAYFLGETCKSKAITLHIDGTILAPSDYNVIRNEENWIKFERVT
GVSIYGGTLDGQGASLWACKNSTKNCPQGIMGLTFSNSSNIDIRGLTSQNSQMFHILVDN
CHNVKLQGVKVSAPGNSPNTDGIHVQYSSKVTIINSHIGTGDDCISIGPGTSNLWIENIA
CGPGHGISIGSLGWVLEEPGVQNVTVKTVTFSGTQNGLRVKTWARSSNGFVRNVLFQHIV
MANVQNPIIIDQNYCPNNDNCPHQGSGVKISDVKYQDIRGTSATEVAVKFDCSKKYPCSG
IALEDVNLSYRDQPAEASCVNVGGRASGSEKQTSCLG

Transcript Sequence

Gene sequence data has not been registered.